Monster, Keep Your Head Up and Breaking News all featured on the posthumous 2010 compilation album Michael.
They have since been the subject of a court case brought by a fan, who claims the vocals are by a session singer.
Sony Music and Jackson's estate said their removal from streaming sites had nothing to do with their authenticity.
In a statement, they described the action as "the simplest and best way to move beyond the conversation associated with these tracks once and for all".
